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Functional metagenomics
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The high-throughput DNA sequencing of bacteria living in the digestive tract enables the stratification of individuals and the characterization of their microbiome.
samples sequenced and analysed per year
GB of data storage
High Performance Computing facility
Integrated pipeline of high throuput sequencing and high resolution metagenomic profiles of intestinal samples
Capture core genes and accessory genes of microbial species, methode published in Bioinformatics (2019)
UPDATED MSP FREE ACCESS
Strain-level characterization of microbial community, inter-individual variability and functional annotation of the microbiome
Shotgun and shallow metagenomics powered by our strong sequencing, bioinformatics and scientists team
De-novo construction of gene catalogues
Identification, annotation and profiling of metagenomic pangenome species
Mapping of human or animal microbiome that has not been explored yet
Identify biomarkers associated with dysbiosis : microbiome signatures used as a diagnostic or prognostic tools
Investigate the impact of prebiotics, probiotics, drugs, functional food on the gut microbiome : modulation of the taxonomic & functional composition
Stratification of individuals for personalized medicine : responders and non-responders individuals (microbiome composition at baseline)
Services
Mapping of species from an already characterized Microbiome (1)
Functional mapping of an already characterized Microbiome (2)
Mapping of an unexplored Microbiome
Studying the impact of an ingredient/molecule on an already characterized Microbiome (2)
Screening of Microbiome-based signatures for diagnosis, prognosis or prediction (2)
Designing Predictive models (2)
WITHOUT SEQUENCING
(Customer Data)
From
40€ / unit
100€ / unit
200€ / unit
Request a quote
WITH SEQUENCING
(ISO9001 data generation)
180€ / unit
410€ / unit
490€ / unit
(1) Estimated price for a study of 200 samples, 1Mreads, with shared industrial property (2) Estimated price for a study of 200 samples, 20Mreads, with shared industrial property
2010 : Qin et al. Nature, The human gut reference catalogue
2011 : Arumugam et al. Nature, Enterotypes
2012 : Qin et al. Nature, Type II Diabetes
2013 : Cotillard et al. Nature, Impact of diet on gut microbiome
2013 : Le Chatelier et al. Nature, Richness of gut microbes and metabolic markers
2014 : Nielsen et al. Nature Biotech, Method for identifying metagenomic species
2014 : Li et al. Nature Biotech, 10 millions genes reference catalog
2014 : Qin et al. Nature, Human gut microbiome alterations in liver cirrhosis
2016 : Pedersen et al. Nature, Microbiome and insuline resistance
2018 : Gopalakrishnan et al. Science, Microbiome and melanoma cancer immunotherapy
2018 : Routy et al. Science, Microbiome and epithelial cancer immunotherapy
2018 : Ruppé et al. Nature Microbiology, Prediction of the intestinal resistome
2019 : Plaza Onate et al. Bioinformatics, Abundance-based reconstitution of microbial pan-genomes
2020 : Cox et al. Gastroenterology, Low FODMAP diet and gut mcirobiome
2020 : Meslier et al. Gut, Beneficial effects of a Mediterranean diet in overweight and obese subjects
All publications
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